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Biclusters are submatrices in the data matrix which satisfy certain conditions of homogeneity. Package contains functions for generating robust biclusters with respect to the initialization parameters for a given bicluster solution contained in a bicluster set in data, the procedure is also known as ensemble biclustering. The set of biclusters is evaluated based on the similarity of its elements (the overlap), and afterwards the hierarchical tree is constructed to obtain cut-off points for the classes of robust biclusters. The result is a number of robust (or super) biclusters with none or low overlap.
| Version: | 1.2 |
| Depends: | biclust, fabia |
| Imports: | methods, Matrix, graphics, stats |
| Published: | 2021-05-28 |
| DOI: | 10.32614/CRAN.package.superbiclust |
| Author: | Tatsiana Khamiakova |
| Maintainer: | Tatsiana Khamiakova <t.tavita at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| CRAN checks: | superbiclust results |
| Reference manual: | superbiclust.pdf |
| Package source: | superbiclust_1.2.tar.gz |
| Windows binaries: | r-devel: superbiclust_1.2.zip, r-release: superbiclust_1.2.zip, r-oldrel: superbiclust_1.2.zip |
| macOS binaries: | r-release (arm64): superbiclust_1.2.tgz, r-oldrel (arm64): superbiclust_1.2.tgz, r-release (x86_64): superbiclust_1.2.tgz, r-oldrel (x86_64): superbiclust_1.2.tgz |
| Old sources: | superbiclust archive |
| Reverse depends: | RcmdrPlugin.BiclustGUI |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.