CRAN Package Check Results for Maintainer ‘Junwei Han <hanjunwei1981 at 163.com>’

Last updated on 2024-12-22 13:49:11 CET.

Package	ERROR	NOTE	OK
CITMIC			13
DrugSim2DR		2	11
DRviaSPCN	6	2	5
DTSEA	4		9
ICDS			13
IDMIR		4	9
iPRISM			13
LncPath		7	6
MiRSEA			13
pathwayTMB	4	2	7
PMAPscore	4	2	7
ProgModule	4		9
psSubpathway	3		10
SMDIC	3		10
ssMutPA			13
SubtypeDrug	3	1	9

Package CITMIC

Current CRAN status: OK: 13

Package DrugSim2DR

Current CRAN status: NOTE: 2, OK: 11

Version: 0.1.1
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘base’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package DRviaSPCN

Current CRAN status: ERROR: 6, NOTE: 2, OK: 5

Additional issues

gcc-UBSAN

Version: 0.1.4
Check: package dependencies
Result: ERROR Packages required but not available: 'GSVA', 'clusterProfiler' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.1.4
Check: package dependencies
Result: ERROR Package required but not available: ‘clusterProfiler’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.4
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: data 5.4Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64

Version: 0.1.4
Check: package dependencies
Result: ERROR Package required but not available: ‘GSVA’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package DTSEA

Current CRAN status: ERROR: 4, OK: 9

Version: 0.0.3
Check: package dependencies
Result: ERROR Packages required but not available: 'fgsea', 'BiocParallel' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.0.3
Check: package dependencies
Result: ERROR Package required but not available: ‘fgsea’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Package ICDS

Current CRAN status: OK: 13

Package IDMIR

Current CRAN status: NOTE: 4, OK: 9

Version: 0.1.0
Check: installed package size
Result: NOTE installed size is 5.2Mb sub-directories of 1Mb or more: data 5.0Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package iPRISM

Current CRAN status: OK: 13

Package LncPath

Current CRAN status: NOTE: 7, OK: 6

Version: 1.1
Check: Rd contents
Result: NOTE Auto-generated content requiring editing in Rd file 'drawAHeatMap.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Auto-generated content requiring editing in Rd file 'findSigGenes.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Auto-generated content requiring editing in Rd file 'geneSetDetail.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Auto-generated content requiring editing in Rd file 'getExampleData.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Auto-generated content requiring editing in Rd file 'getNet.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Auto-generated content requiring editing in Rd file 'lncPath.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Auto-generated content requiring editing in Rd file 'lncPath2Table.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Auto-generated content requiring editing in Rd file 'plotRunningES.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Auto-generated content requiring editing in Rd file 'printSignifResult.Rd': \keyword: ‘~kwd1’ \keyword: ‘~kwd2’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1
Check: for non-standard things in the check directory
Result: NOTE Found the following files/directories: ‘tTestTable.rda’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘graph’ Flavor: r-oldrel-macos-x86_64

Package MiRSEA

Current CRAN status: OK: 13

Package pathwayTMB

Current CRAN status: ERROR: 4, NOTE: 2, OK: 7

Version: 0.1.3
Check: package dependencies
Result: ERROR Package required but not available: ‘clusterProfiler’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.3
Check: dependencies in R code
Result: NOTE Namespaces in Imports field not imported from: ‘clusterProfiler’ ‘purrr’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package PMAPscore

Current CRAN status: ERROR: 4, NOTE: 2, OK: 7

Version: 0.1.1
Check: package dependencies
Result: ERROR Package required but not available: ‘clusterProfiler’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.1
Check: dependencies in R code
Result: NOTE Namespaces in Imports field not imported from: ‘base’ ‘grDevices’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package ProgModule

Current CRAN status: ERROR: 4, OK: 9

Version: 0.1.0
Check: package dependencies
Result: ERROR Package required but not available: ‘pathwayTMB’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Package psSubpathway

Current CRAN status: ERROR: 3, OK: 10

Version: 0.1.3
Check: package dependencies
Result: ERROR Package required but not available: ‘GSVA’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package SMDIC

Current CRAN status: ERROR: 3, OK: 10

Version: 0.1.6
Check: package dependencies
Result: ERROR Package required but not available: ‘GSVA’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package ssMutPA

Current CRAN status: OK: 13

Package SubtypeDrug

Current CRAN status: ERROR: 3, NOTE: 1, OK: 9

Version: 0.1.9
Check: package dependencies
Result: ERROR Package required but not available: ‘GSVA’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.1.9
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: data 5.0Mb Flavor: r-release-macos-x86_64