CRAN Package Check Results for Maintainer ‘Jason Sinnwell <sinnwell.jason at mayo.edu>’

Last updated on 2025-09-04 09:51:36 CEST.

Package	NOTE	OK
fam.recrisk		13
haplo.stats		13
kinship2	6	7
pedgene	2	11
pleio	2	11
regmed		13
smartDesign		13
vcpen		13

Package fam.recrisk

Current CRAN status: OK: 13

Package haplo.stats

Current CRAN status: OK: 13

Package kinship2

Current CRAN status: NOTE: 6, OK: 7

Version: 1.9.6.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: ibdMatrix.Rd: Matrix Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Package pedgene

Current CRAN status: NOTE: 2, OK: 11

Version: 3.9
Check: tests
Result: NOTE Running ‘test.pedgene.R’ Comparing ‘test.pedgene.Rout’ to ‘test.pedgene.Rout.save’ ...11c11 < Warning: kinship2 package is deprecated for R <= 4.5; switch functionality to Pedixplorer from BioConductor> require(pedgene) --- > > require(pedgene) Running ‘test.pedgene.expanded.R’ [6s/15s] Comparing ‘test.pedgene.expanded.Rout’ to ‘test.pedgene.expanded.Rout.save’ ...28c28 < Warning: kinship2 package is deprecated for R <= 4.5; switch functionality to Pedixplorer from BioConductor> --- > > Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.9
Check: tests
Result: NOTE Running ‘test.pedgene.R’ Comparing ‘test.pedgene.Rout’ to ‘test.pedgene.Rout.save’ ...11c11 < Warning: kinship2 package is deprecated for R <= 4.5; switch functionality to Pedixplorer from BioConductor> require(pedgene) --- > > require(pedgene) Running ‘test.pedgene.expanded.R’ Comparing ‘test.pedgene.expanded.Rout’ to ‘test.pedgene.expanded.Rout.save’ ...28c28 < Warning: kinship2 package is deprecated for R <= 4.5; switch functionality to Pedixplorer from BioConductor> --- > > Flavor: r-devel-linux-x86_64-fedora-gcc

Package pleio

Current CRAN status: NOTE: 2, OK: 11

Version: 1.9
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Jason Sinnwell <sinnwell.jason@mayo.edu>’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = c("Daniel", "J"), family = "Schaid", role = "aut"), person(given = "Jason", family = "Sinnwell", role = "cre", email = "sinnwell.jason@mayo.edu")) as necessary. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package regmed

Current CRAN status: OK: 13

Package smartDesign

Current CRAN status: OK: 13

Package vcpen

Current CRAN status: OK: 13