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Imports real-time thermo cycler (qPCR) data from Real-time PCR Data Markup Language (RDML) and transforms to the appropriate formats of the 'qpcR' and 'chipPCR' packages. Contains a dendrogram visualization for the structure of RDML object and GUI for RDML editing.
Version: | 1.0 |
Depends: | R (≥ 3.2.0) |
Imports: | checkmate (≥ 1.6.2), data.table, pipeR, readxl, rlist (≥ 0.4), R6 (≥ 2.0.1), stringr, tools (≥ 3.2), xml2 (≥ 1.0), lubridate (≥ 1.6.0) |
Suggests: | chipPCR, magrittr, reshape2, qpcR, dplyr, ggplot2, knitr, kfigr, MBmca, shiny, shinyjs, shinythemes, shinyMolBio, V8, testthat |
Published: | 2019-06-25 |
DOI: | 10.32614/CRAN.package.RDML |
Author: | Konstantin A. Blagodatskikh [cre, aut], Stefan Roediger [aut], Michal Burdukiewicz [aut], Andrej-Nikolai Spiess [aut] |
Maintainer: | Konstantin A. Blagodatskikh <k.blag at yandex.ru> |
License: | MIT + file LICENSE |
URL: | https://github.com/kablag/RDML |
NeedsCompilation: | no |
Citation: | RDML citation info |
Materials: | README ChangeLog |
CRAN checks: | RDML results |
Reference manual: | RDML.pdf |
Package source: | RDML_1.0.tar.gz |
Windows binaries: | r-devel: RDML_1.0.zip, r-release: RDML_1.0.zip, r-oldrel: RDML_1.0.zip |
macOS binaries: | r-release (arm64): RDML_1.0.tgz, r-oldrel (arm64): RDML_1.0.tgz, r-release (x86_64): RDML_1.0.tgz, r-oldrel (x86_64): RDML_1.0.tgz |
Old sources: | RDML archive |
Reverse imports: | shinyMolBio |
Reverse suggests: | chipPCR |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.