Last updated on 2025-09-04 09:51:18 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| datarium | 13 | ||
| factoextra | 13 | ||
| fastqcr | 13 | ||
| ggcorrplot | 2 | 11 | |
| ggpubr | 4 | 9 | |
| rstatix | 4 | 9 | |
| survminer | 1 | 12 |
Current CRAN status: OK: 13
Current CRAN status: NOTE: 13
Version: 1.0.7
Check: Rd files
Result: NOTE
checkRd: (-1) fviz_nbclust.Rd:75: Lost braces; missing escapes or markup?
75 | (2001) proposed: "the smallest k such that gap(k) >= gap(k+1) - s_{k+1}".
| ^
checkRd: (-1) fviz_nbclust.Rd:77: Lost braces; missing escapes or markup?
77 | SE.factor*s_{k+1}" where SE.factor is a numeric value which can be 1
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 2, OK: 11
Version: 0.1.4.1
Check: DESCRIPTION meta-information
Result: NOTE
Author field differs from that derived from Authors@R
Author: ‘Alboukadel Kassambara [aut, cre], Indrajeet Patil [ctb] (<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets)’
Authors@R: ‘Alboukadel Kassambara [aut, cre], Indrajeet Patil [ctb] (ORCID: <https://orcid.org/0000-0003-1995-6531>, Twitter: @patilindrajeets)’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Current CRAN status: ERROR: 4, OK: 9
Version: 0.6.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [23s/27s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(ggpubr)
Loading required package: ggplot2
>
> test_check("ggpubr")
[ FAIL 3 | WARN 1 | SKIP 0 | PASS 215 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-compare_means.R:52:3'): compare_means works for pairwise comparisons ──
`results` not equal to `expected`.
Component "p.format": 3 string mismatches
Component "p.signif": 1 string mismatch
── Failure ('test-compare_means.R:64:3'): compare_means works for comparison against reference groups ──
`results` not equal to `expected`.
Component "p.format": 2 string mismatches
── Failure ('test-stat_compare_means.R:45:3'): stat_compare_means works for two independent tests: Wilcoxon test ──
`label_coords_expected` not equal to `label_coords_observed`.
Component "label": 1 string mismatch
[ FAIL 3 | WARN 1 | SKIP 0 | PASS 215 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.6.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [16s/21s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(ggpubr)
Loading required package: ggplot2
>
> test_check("ggpubr")
[ FAIL 2 | WARN 1 | SKIP 0 | PASS 216 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-compare_means.R:52:3'): compare_means works for pairwise comparisons ──
`results` not equal to `expected`.
Component "p.format": 3 string mismatches
Component "p.signif": 1 string mismatch
── Failure ('test-compare_means.R:64:3'): compare_means works for comparison against reference groups ──
`results` not equal to `expected`.
Component "p.format": 2 string mismatches
[ FAIL 2 | WARN 1 | SKIP 0 | PASS 216 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.6.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [38s/48s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(ggpubr)
Loading required package: ggplot2
>
> test_check("ggpubr")
[ FAIL 2 | WARN 1 | SKIP 0 | PASS 216 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-compare_means.R:52:3'): compare_means works for pairwise comparisons ──
`results` not equal to `expected`.
Component "p.format": 3 string mismatches
Component "p.signif": 1 string mismatch
── Failure ('test-compare_means.R:64:3'): compare_means works for comparison against reference groups ──
`results` not equal to `expected`.
Component "p.format": 2 string mismatches
[ FAIL 2 | WARN 1 | SKIP 0 | PASS 216 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.6.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [39s/72s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(ggpubr)
Loading required package: ggplot2
>
> test_check("ggpubr")
[ FAIL 2 | WARN 1 | SKIP 0 | PASS 216 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-compare_means.R:52:3'): compare_means works for pairwise comparisons ──
`results` not equal to `expected`.
Component "p.format": 3 string mismatches
Component "p.signif": 1 string mismatch
── Failure ('test-compare_means.R:64:3'): compare_means works for comparison against reference groups ──
`results` not equal to `expected`.
Component "p.format": 2 string mismatches
[ FAIL 2 | WARN 1 | SKIP 0 | PASS 216 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Current CRAN status: ERROR: 4, NOTE: 9
Version: 0.7.2
Check: Rd files
Result: NOTE
checkRd: (-1) box_m.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) box_m.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) box_m.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) box_m.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) wilcox_test.Rd:91: Lost braces; missing escapes or markup?
91 | distribution of \code{(u+v)/2}, where \code{u} and {v} are independent, each
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.7.2
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [13s/17s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rstatix)
Attaching package: 'rstatix'
The following object is masked from 'package:stats':
filter
>
> test_check("rstatix")
[ FAIL 5 | WARN 21 | SKIP 0 | PASS 127 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_ns.R:20:3'): remove_ns works when col is logical ──────
`p.false` not equal to c(0.199, 0.063, 0.009).
1/3 mismatches
[1] 0.21 - 0.199 == 0.011
── Failure ('test-wilcox_test.R:22:3'): Checking two-sample unpaired test ──────
signif(res$p, 3) not equal to 0.0645.
1/1 mismatches
[1] 0.0647 - 0.0645 == 2e-04
── Failure ('test-wilcox_test.R:45:3'): Checking pairwise comparisons ──────────
signif(res$p, 3) not equal to c(7.02e-06, 8.41e-08, 0.000177).
3/3 mismatches (average diff: 3.59e-05)
[1] 7.74e-07 - 7.02e-06 == -6.25e-06
[2] 4.35e-11 - 8.41e-08 == -8.41e-08
[3] 7.57e-05 - 1.77e-04 == -1.01e-04
── Failure ('test-wilcox_test.R:56:3'): Checking pairwise comparison against ref group ──
signif(res$p, 3) not equal to c(7.02e-06, 8.41e-08).
2/2 mismatches (average diff: 3.17e-06)
[1] 7.74e-07 - 7.02e-06 == -6.25e-06
[2] 4.35e-11 - 8.41e-08 == -8.41e-08
── Failure ('test-wilcox_test.R:82:3'): Checking grouped tests ─────────────────
signif(res$p, 3) not equal to c(0.0232, 0.00403, 1).
3/3 mismatches (average diff: 0.0057)
[1] 0.02150 - 0.02320 == -0.00170
[2] 0.00264 - 0.00403 == -0.00139
[3] 0.98600 - 1.00000 == -0.01400
[ FAIL 5 | WARN 21 | SKIP 0 | PASS 127 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.7.2
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [9s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rstatix)
Attaching package: 'rstatix'
The following object is masked from 'package:stats':
filter
>
> test_check("rstatix")
[ FAIL 5 | WARN 21 | SKIP 0 | PASS 127 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_ns.R:20:3'): remove_ns works when col is logical ──────
`p.false` not equal to c(0.199, 0.063, 0.009).
1/3 mismatches
[1] 0.197 - 0.199 == -0.002
── Failure ('test-wilcox_test.R:22:3'): Checking two-sample unpaired test ──────
signif(res$p, 3) not equal to 0.0645.
1/1 mismatches
[1] 0.0637 - 0.0645 == -8e-04
── Failure ('test-wilcox_test.R:45:3'): Checking pairwise comparisons ──────────
signif(res$p, 3) not equal to c(7.02e-06, 8.41e-08, 0.000177).
3/3 mismatches (average diff: 3.59e-05)
[1] 7.74e-07 - 7.02e-06 == -6.25e-06
[2] 4.35e-11 - 8.41e-08 == -8.41e-08
[3] 7.57e-05 - 1.77e-04 == -1.01e-04
── Failure ('test-wilcox_test.R:56:3'): Checking pairwise comparison against ref group ──
signif(res$p, 3) not equal to c(7.02e-06, 8.41e-08).
2/2 mismatches (average diff: 3.17e-06)
[1] 7.74e-07 - 7.02e-06 == -6.25e-06
[2] 4.35e-11 - 8.41e-08 == -8.41e-08
── Failure ('test-wilcox_test.R:82:3'): Checking grouped tests ─────────────────
signif(res$p, 3) not equal to c(0.0232, 0.00403, 1).
3/3 mismatches (average diff: 0.0064)
[1] 0.01980 - 0.02320 == -0.0034
[2] 0.00223 - 0.00403 == -0.0018
[3] 0.98600 - 1.00000 == -0.0140
[ FAIL 5 | WARN 21 | SKIP 0 | PASS 127 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.7.2
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [21s/27s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rstatix)
Attaching package: 'rstatix'
The following object is masked from 'package:stats':
filter
>
> test_check("rstatix")
[ FAIL 7 | WARN 21 | SKIP 0 | PASS 125 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_ns.R:20:3'): remove_ns works when col is logical ──────
`p.false` not equal to c(0.199, 0.063, 0.009).
1/3 mismatches
[1] 0.197 - 0.199 == -0.002
── Failure ('test-wilcox_test.R:22:3'): Checking two-sample unpaired test ──────
signif(res$p, 3) not equal to 0.0645.
1/1 mismatches
[1] 0.0637 - 0.0645 == -8e-04
── Failure ('test-wilcox_test.R:33:3'): Checking two-sample paired test ────────
as.numeric(res$statistic) not equal to 350.
1/1 mismatches
[1] 369 - 350 == 19
── Failure ('test-wilcox_test.R:34:3'): Checking two-sample paired test ────────
signif(res$p, 3) not equal to 0.00431.
1/1 mismatches
[1] 0.00383 - 0.00431 == -0.00048
── Failure ('test-wilcox_test.R:45:3'): Checking pairwise comparisons ──────────
signif(res$p, 3) not equal to c(7.02e-06, 8.41e-08, 0.000177).
3/3 mismatches (average diff: 3.59e-05)
[1] 7.74e-07 - 7.02e-06 == -6.25e-06
[2] 4.35e-11 - 8.41e-08 == -8.41e-08
[3] 7.57e-05 - 1.77e-04 == -1.01e-04
── Failure ('test-wilcox_test.R:56:3'): Checking pairwise comparison against ref group ──
signif(res$p, 3) not equal to c(7.02e-06, 8.41e-08).
2/2 mismatches (average diff: 3.17e-06)
[1] 7.74e-07 - 7.02e-06 == -6.25e-06
[2] 4.35e-11 - 8.41e-08 == -8.41e-08
── Failure ('test-wilcox_test.R:82:3'): Checking grouped tests ─────────────────
signif(res$p, 3) not equal to c(0.0232, 0.00403, 1).
3/3 mismatches (average diff: 0.0064)
[1] 0.01980 - 0.02320 == -0.0034
[2] 0.00223 - 0.00403 == -0.0018
[3] 0.98600 - 1.00000 == -0.0140
[ FAIL 7 | WARN 21 | SKIP 0 | PASS 125 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.7.2
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [21s/24s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rstatix)
Attaching package: 'rstatix'
The following object is masked from 'package:stats':
filter
>
> test_check("rstatix")
[ FAIL 7 | WARN 21 | SKIP 0 | PASS 125 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-remove_ns.R:20:3'): remove_ns works when col is logical ──────
`p.false` not equal to c(0.199, 0.063, 0.009).
1/3 mismatches
[1] 0.197 - 0.199 == -0.002
── Failure ('test-wilcox_test.R:22:3'): Checking two-sample unpaired test ──────
signif(res$p, 3) not equal to 0.0645.
1/1 mismatches
[1] 0.0637 - 0.0645 == -8e-04
── Failure ('test-wilcox_test.R:33:3'): Checking two-sample paired test ────────
as.numeric(res$statistic) not equal to 350.
1/1 mismatches
[1] 369 - 350 == 19
── Failure ('test-wilcox_test.R:34:3'): Checking two-sample paired test ────────
signif(res$p, 3) not equal to 0.00431.
1/1 mismatches
[1] 0.00383 - 0.00431 == -0.00048
── Failure ('test-wilcox_test.R:45:3'): Checking pairwise comparisons ──────────
signif(res$p, 3) not equal to c(7.02e-06, 8.41e-08, 0.000177).
3/3 mismatches (average diff: 3.59e-05)
[1] 7.74e-07 - 7.02e-06 == -6.25e-06
[2] 4.35e-11 - 8.41e-08 == -8.41e-08
[3] 7.57e-05 - 1.77e-04 == -1.01e-04
── Failure ('test-wilcox_test.R:56:3'): Checking pairwise comparison against ref group ──
signif(res$p, 3) not equal to c(7.02e-06, 8.41e-08).
2/2 mismatches (average diff: 3.17e-06)
[1] 7.74e-07 - 7.02e-06 == -6.25e-06
[2] 4.35e-11 - 8.41e-08 == -8.41e-08
── Failure ('test-wilcox_test.R:82:3'): Checking grouped tests ─────────────────
signif(res$p, 3) not equal to c(0.0232, 0.00403, 1).
3/3 mismatches (average diff: 0.0064)
[1] 0.01980 - 0.02320 == -0.0034
[2] 0.00223 - 0.00403 == -0.0018
[3] 0.98600 - 1.00000 == -0.0140
[ FAIL 7 | WARN 21 | SKIP 0 | PASS 125 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 1, OK: 12
Version: 0.5.1
Check: installed package size
Result: NOTE
installed size is 6.0Mb
sub-directories of 1Mb or more:
doc 5.5Mb
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.