CRAN Package Check Results for Maintainer ‘Marc Becker <marcbecker at posteo.de>’

Last updated on 2024-07-27 15:50:54 CEST.

Package	ERROR	NOTE	OK
bbotk	2		11
farff		1	12
mlr3	2		11
mlr3batchmark		2	11
mlr3fselect	2		11
mlr3hyperband	2		11
mlr3learners	2		11
mlr3measures			13
mlr3spatial		2	11
mlr3tuning	2		11
mlr3tuningspaces			13
mlr3verse	2		11
mlr3viz	2	1	10
rush			13

Package bbotk

Current CRAN status: ERROR: 2, OK: 11

Version: 1.0.1
Check: package dependencies
Result: ERROR Package required and available but unsuitable version: ‘paradox’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package farff

Current CRAN status: NOTE: 1, OK: 12

Version: 1.1.1
Check: Rd cross-references
Result: NOTE Undeclared package ‘RWeka’ in Rd xrefs Flavor: r-devel-linux-x86_64-fedora-clang

Package mlr3

Current CRAN status: ERROR: 2, OK: 11

Version: 0.20.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: Note: possible error in 'p_int(1, default = 1, ': unused arguments (aggr = iter_aggr, in_tune_fn = iter_tune_fn, disable_in_tune = list(early_stopping = FALSE)) See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.3/mlr3.Rcheck/00install.out’ for details. Information on the location(s) of code generating the ‘Note’s can be obtained by re-running with environment variable R_KEEP_PKG_SOURCE set to ‘yes’. Flavor: r-oldrel-macos-arm64

Version: 0.20.1
Check: R code for possible problems
Result: NOTE .__LearnerClassifDebug__initialize: possible error in p_int(1, default = 1, tags = c("train", "hotstart", "internal_tuning"), aggr = iter_aggr, in_tune_fn = iter_tune_fn, disable_in_tune = list(early_stopping = FALSE)): unused arguments (aggr = iter_aggr, in_tune_fn = iter_tune_fn, disable_in_tune = list(early_stopping = FALSE)) Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.20.1
Check: examples
Result: ERROR Running examples in ‘mlr3-Ex.R’ failed The error most likely occurred in: > ### Name: HotstartStack > ### Title: Stack for Hot Start Learners > ### Aliases: HotstartStack > > ### ** Examples > > # train learner on pima task > task = tsk("pima") > learner = lrn("classif.debug", iter = 1) Error in p_int(1, default = 1, tags = c("train", "hotstart", "internal_tuning"), : unused arguments (aggr = iter_aggr, in_tune_fn = iter_tune_fn, disable_in_tune = list(early_stopping = FALSE)) Calls: lrn ... <Anonymous> -> initialize -> .__LearnerClassifDebug__initialize Execution halted Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.20.1
Check: tests
Result: ERROR Running ‘testthat.R’ [47s/53s] Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: Backtrace: ▆ 1. └─mlr3::lrn("classif.debug") at test_set_threads.R:5:3 2. └─mlr3misc::dictionary_sugar_get(mlr_learners, .key, ...) 3. └─mlr3misc:::dictionary_get(dict, .key) 4. └─mlr3misc:::dictionary_initialize_item(key, obj, dots) 5. ├─base::do.call(constructor, cargs) 6. └─mlr3 (local) `<fn>`() 7. └─LearnerClassifDebug$new() 8. └─mlr3 (local) initialize(...) 9. └─mlr3:::.__LearnerClassifDebug__initialize(...) [ FAIL 124 | WARN 0 | SKIP 4 | PASS 11578 ] Error: Test failures Execution halted Flavor: r-oldrel-macos-arm64

Version: 0.20.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: Note: possible error in 'p_int(1, default = 1, ': unused arguments (aggr = iter_aggr, in_tune_fn = iter_tune_fn, disable_in_tune = list(early_stopping = FALSE)) See ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.3/mlr3.Rcheck/00install.out’ for details. Information on the location(s) of code generating the ‘Note’s can be obtained by re-running with environment variable R_KEEP_PKG_SOURCE set to ‘yes’. Flavor: r-oldrel-macos-x86_64

Version: 0.20.1
Check: tests
Result: ERROR Running ‘testthat.R’ [72s/111s] Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: Backtrace: ▆ 1. └─mlr3::lrn("classif.debug") at test_set_threads.R:5:3 2. └─mlr3misc::dictionary_sugar_get(mlr_learners, .key, ...) 3. └─mlr3misc:::dictionary_get(dict, .key) 4. └─mlr3misc:::dictionary_initialize_item(key, obj, dots) 5. ├─base::do.call(constructor, cargs) 6. └─mlr3 (local) `<fn>`() 7. └─LearnerClassifDebug$new() 8. └─mlr3 (local) initialize(...) 9. └─mlr3:::.__LearnerClassifDebug__initialize(...) [ FAIL 124 | WARN 0 | SKIP 4 | PASS 11578 ] Error: Test failures Execution halted Flavor: r-oldrel-macos-x86_64

Package mlr3batchmark

Current CRAN status: NOTE: 2, OK: 11

Version: 0.1.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: batchmark.Rd: data.table Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package mlr3fselect

Current CRAN status: ERROR: 2, OK: 11

Version: 1.0.0
Check: package dependencies
Result: ERROR Packages required and available but unsuitable versions: 'bbotk', 'paradox' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package mlr3hyperband

Current CRAN status: ERROR: 2, OK: 11

Version: 0.6.0
Check: package dependencies
Result: ERROR Packages required and available but unsuitable versions: 'mlr3tuning', 'bbotk' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package mlr3learners

Current CRAN status: ERROR: 2, OK: 11

Version: 0.7.0
Check: package dependencies
Result: ERROR Packages required and available but unsuitable versions: 'mlr3', 'paradox' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package mlr3measures

Current CRAN status: OK: 13

Package mlr3spatial

Current CRAN status: NOTE: 2, OK: 11

Version: 0.5.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: TaskClassifST.Rd: TaskClassif, DataBackend, DataBackendDataTable, convert_task TaskRegrST.Rd: TaskRegr, DataBackend, DataBackendDataTable, convert_task as_data_backend.Rd: DataBackend as_task_classif_st.Rd: DataBackend, TaskRegr, convert_task as_task_regr_st.Rd: DataBackend, TaskClassif, convert_task predict_spatial.Rd: Learner Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package mlr3tuning

Current CRAN status: ERROR: 2, OK: 11

Version: 1.0.0
Check: package dependencies
Result: ERROR Packages required and available but unsuitable versions: 'mlr3', 'paradox', 'bbotk' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package mlr3tuningspaces

Current CRAN status: OK: 13

Package mlr3verse

Current CRAN status: ERROR: 2, OK: 11

Version: 0.3.0
Check: package dependencies
Result: ERROR Packages required and available but unsuitable versions: 'mlr3', 'bbotk', 'mlr3fselect', 'mlr3learners', 'mlr3tuning', 'paradox' See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package mlr3viz

Current CRAN status: ERROR: 2, NOTE: 1, OK: 10

Version: 0.9.0
Check: Rd cross-references
Result: NOTE Undeclared package ‘stabm’ in Rd xrefs Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.9.0
Check: Rd cross-references
Result: WARN Missing link or links in documentation object 'autoplot.EnsembleFSResult.Rd': ‘[mlr3fselect:ensemble_fs_result]{EnsembleFSResult}’ ‘[mlr3fselect:ensemble_fs_result]{mlr3fselect::EnsembleFSResult}’ Missing link or links in documentation object 'autoplot.OptimInstanceBatchSingleCrit.Rd': ‘[bbotk:OptimInstanceBatchSingleCrit]{bbotk::OptimInstanceBatchSingleCrit}’ Missing link or links in documentation object 'autoplot.TuningInstanceBatchSingleCrit.Rd': ‘[mlr3tuning:TuningInstanceBatchSingleCrit]{mlr3tuning::TuningInstanceBatchSingleCrit}’ See section 'Cross-references' in the 'Writing R Extensions' manual. Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.9.0
Check: examples
Result: ERROR Running examples in ‘mlr3viz-Ex.R’ failed The error most likely occurred in: > ### Name: autoplot.OptimInstanceBatchSingleCrit > ### Title: Plots for Optimization Instances > ### Aliases: autoplot.OptimInstanceBatchSingleCrit > > ### ** Examples > > if (requireNamespace("mlr3") && requireNamespace("bbotk") && requireNamespace("patchwork")) { + library(bbotk) + library(paradox) + + fun = function(xs) { + c(y = -(xs[[1]] - 2)^2 - (xs[[2]] + 3)^2 + 10) + } + domain = ps( + x1 = p_dbl(-10, 10), + x2 = p_dbl(-5, 5) + ) + codomain = ps( + y = p_dbl(tags = "maximize") + ) + obfun = ObjectiveRFun$new( + fun = fun, + domain = domain, + codomain = codomain + ) + + instance = oi(objective = obfun, terminator = trm("evals", n_evals = 20)) + + optimizer = opt("random_search", batch_size = 2) + optimizer$optimize(instance) + + # plot y versus batch number + print(autoplot(instance, type = "performance")) + + # plot x1 values versus performance + print(autoplot(instance, type = "marginal", cols_x = "x1")) + + # plot parallel coordinates plot + print(autoplot(instance, type = "parallel")) + + # plot pairs + print(autoplot(instance, type = "pairs")) + + # plot incumbent + print(autoplot(instance, type = "incumbent")) + } Loading required namespace: bbotk Loading required namespace: patchwork Loading required package: paradox Error in oi(objective = obfun, terminator = trm("evals", n_evals = 20)) : could not find function "oi" Execution halted Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.9.0
Check: tests
Result: ERROR Running ‘testthat.R’ [21s/14s] Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: • TuningInstanceSingleCrit/tisc-parameter-trafo-01.svg • TuningInstanceSingleCrit/tisc-parameter-trafo-02.svg • TuningInstanceSingleCrit/tisc-parameter-x-domain-01.svg • TuningInstanceSingleCrit/tisc-performance.svg • TuningInstanceSingleCrit/tisc-points.svg • TuningInstanceSingleCrit/tisc-surface-grid-50.svg • TuningInstanceSingleCrit/tisc-surface-regr-lm.svg • TuningInstanceSingleCrit/tisc-surface.svg • plot_learner_prediction/learner-prediction-1d-se.svg • plot_learner_prediction/learner-prediction-binary-prob.svg • plot_learner_prediction/learner-prediction-binary-response.svg • plot_learner_prediction/learner-prediction-categorical.svg • plot_learner_prediction/learner-prediction-prob.svg Error: Test failures Execution halted Flavor: r-oldrel-macos-arm64

Version: 0.9.0
Check: tests
Result: ERROR Running ‘testthat.R’ [32s/30s] Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: • TuningInstanceSingleCrit/tisc-parameter-trafo-01.svg • TuningInstanceSingleCrit/tisc-parameter-trafo-02.svg • TuningInstanceSingleCrit/tisc-parameter-x-domain-01.svg • TuningInstanceSingleCrit/tisc-performance.svg • TuningInstanceSingleCrit/tisc-points.svg • TuningInstanceSingleCrit/tisc-surface-grid-50.svg • TuningInstanceSingleCrit/tisc-surface-regr-lm.svg • TuningInstanceSingleCrit/tisc-surface.svg • plot_learner_prediction/learner-prediction-1d-se.svg • plot_learner_prediction/learner-prediction-binary-prob.svg • plot_learner_prediction/learner-prediction-binary-response.svg • plot_learner_prediction/learner-prediction-categorical.svg • plot_learner_prediction/learner-prediction-prob.svg Error: Test failures Execution halted Flavor: r-oldrel-macos-x86_64

Package rush

Current CRAN status: OK: 13