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With this tool, a user should be able to quickly implement complex random effect models through simple C++ templates. The package combines 'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain an efficient implementation of the applied Laplace approximation with exact derivatives. Key features are: Automatic sparseness detection, parallelism through 'BLAS' and parallel user templates.
Version: | 1.9.15 |
Depends: | R (≥ 3.0.0) |
Imports: | graphics, methods, stats, utils, Matrix (≥ 1.0-12) |
LinkingTo: | Matrix, RcppEigen |
Suggests: | numDeriv, parallel |
Published: | 2024-09-09 |
DOI: | 10.32614/CRAN.package.TMB |
Author: | Kasper Kristensen [aut, cre, cph], Brad Bell [cph], Hans Skaug [ctb], Arni Magnusson [ctb], Casper Berg [ctb], Anders Nielsen [ctb], Martin Maechler [ctb], Theo Michelot [ctb], Mollie Brooks [ctb], Alex Forrence [ctb], Christoffer Moesgaard Albertsen [ctb], Cole Monnahan [ctb] |
Maintainer: | Kasper Kristensen <kaskr at dtu.dk> |
BugReports: | https://github.com/kaskr/adcomp/issues |
License: | GPL-2 |
Copyright: | See the file COPYRIGHTS TMB copyright details |
URL: | https://github.com/kaskr/adcomp/wiki |
NeedsCompilation: | yes |
Citation: | TMB citation info |
Materials: | NEWS |
In views: | Environmetrics, MixedModels |
CRAN checks: | TMB results |
Reference manual: | TMB.pdf |
Package source: | TMB_1.9.15.tar.gz |
Windows binaries: | r-devel: TMB_1.9.15.zip, r-release: TMB_1.9.15.zip, r-oldrel: TMB_1.9.15.zip |
macOS binaries: | r-release (arm64): TMB_1.9.15.tgz, r-oldrel (arm64): TMB_1.9.15.tgz, r-release (x86_64): TMB_1.9.15.tgz, r-oldrel (x86_64): TMB_1.9.15.tgz |
Old sources: | TMB archive |
Reverse depends: | ef, gllvm, hmmTMB, phylosem |
Reverse imports: | ASMbook, bage, BayesGP, clustTMB, disaggregation, DLMtool, dsem, epigrowthfit, fishmethods, FRK, gadget3, GeoAdjust, glmmTMB, LocalCop, marked, MLZ, mmrm, QFASA, RNAdecay, RTMB, SAMtool, sdmTMB, SPAS, SpatialGEV, ssdtools, stelfi, tmbstan, tramME, tsdistributions, tsgarch, unmarked |
Reverse linking to: | bage, BayesGP, clustTMB, disaggregation, DLMtool, dsem, ef, epigrowthfit, fishmethods, FRK, GeoAdjust, gllvm, glmmTMB, hmmTMB, LocalCop, MLZ, mmrm, phylosem, QFASA, RTMB, SAMtool, sdmTMB, SPAS, SpatialGEV, ssdtools, stelfi, tmbstan, tramME, tsdistributions, tsgarch, unmarked |
Reverse suggests: | adnuts, broom.mixed, covafillr, insight, MSEtool, parameters, sjPlot |
Please use the canonical form https://CRAN.R-project.org/package=TMB to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.