CRAN Package Check Results for Maintainer ‘Aurélie Siberchicot <aurelie.siberchicot at univ-lyon1.fr>’

Last updated on 2025-02-16 10:51:10 CET.

Package	NOTE	OK
ade4	11	4
ade4TkGUI		15
adegraphics	4	11
adephylo	3	12
adespatial		15
aods3		15
CINID		15
DRomics	6	9
fitdistrplus		15
Interatrix		15
LDcorSV		15
LifemapR	6	9
MareyMap		15
Mondrian		15
nlsMicrobio		15
nlstools		15
OnAge		15
phylter	12	3

Package ade4

Current CRAN status: NOTE: 11, OK: 4

Version: 1.7-22
Check: Rd files
Result: NOTE checkRd: (-1) varipart.Rd:19: Lost braces 19 | \item{type}{a character specifying the algorithm which should be used to adjust R-squared (either \code{"simulated"} or \ code{"parametric"}).} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-patched-linux-x86_64, r-release-macos-arm64

Version: 1.7-23
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘sp’ All declared Imports should be used. Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.7-22
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘sp’ All declared Imports should be used. Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.7-22
Check: installed package size
Result: NOTE installed size is 9.1Mb sub-directories of 1Mb or more: R 2.0Mb data 3.0Mb libs 2.5Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-windows-x86_64

Version: 1.7-23
Check: installed package size
Result: NOTE installed size is 9.3Mb sub-directories of 1Mb or more: R 2.0Mb data 2.9Mb libs 2.7Mb Flavors: r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-x86_64

Package ade4TkGUI

Current CRAN status: OK: 15

Package adegraphics

Current CRAN status: NOTE: 4, OK: 11

Version: 1.0-21
Check: installed package size
Result: NOTE installed size is 5.3Mb sub-directories of 1Mb or more: R 2.0Mb doc 2.7Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package adephylo

Current CRAN status: NOTE: 3, OK: 12

Version: 1.1-16
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: abouheif.Rd: phylo4d-class adephylo-package.Rd: phylo4d-class, phylo4-class bullseye.Rd: phylo4-class, phylo4d-class distRoot.Rd: phylo4-class, phylo4d-class distTips.Rd: phylo4-class, phylo4d-class listDD.Rd: phylo4-class, phylo4d-class listTips.Rd: phylo4-class, phylo4d-class miscUtils.Rd: phylo4-class orthobasis.Rd: phylo4-class, phylo4d-class orthogram.Rd: phylo4-class, phylo4d-class ppca.Rd: phylo4d-class, phylo4-class proxTips.Rd: phylo4-class, phylo4d-class sp.tips.Rd: phylo4-class, phylo4d-class table.phylo4d.Rd: phylo4d-class treePart.Rd: phylo4-class, phylo4d-class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package adespatial

Current CRAN status: OK: 15

Package aods3

Current CRAN status: OK: 15

Package CINID

Current CRAN status: OK: 15

Package DRomics

Current CRAN status: NOTE: 6, OK: 9

Version: 2.6-2
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: doc 2.5Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package fitdistrplus

Current CRAN status: OK: 15

Package Interatrix

Current CRAN status: OK: 15

Package LDcorSV

Current CRAN status: OK: 15

Package LifemapR

Current CRAN status: NOTE: 6, OK: 9

Version: 1.1.4
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘create_matrix.R’ ‘display_map.R’ ‘draw_Lifemap.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64, r-devel-windows-x86_64

Package MareyMap

Current CRAN status: OK: 15

Package Mondrian

Current CRAN status: OK: 15

Package nlsMicrobio

Current CRAN status: OK: 15

Package nlstools

Current CRAN status: OK: 15

Package OnAge

Current CRAN status: OK: 15

Package phylter

Current CRAN status: NOTE: 12, OK: 3

Version: 0.9.11
Check: Rd files
Result: NOTE checkRd: (-1) phylter.Rd:51: Lost braces; missing escapes or markup? 51 | the output ({out$DiscardedGenes}).} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64