CRAN Package Check Results for Maintainer ‘Frederic Bertrand <frederic.bertrand at utt.fr>’

Last updated on 2024-11-21 19:53:08 CET.

Package FAIL WARN NOTE OK
bigalgebra 13
BioStatR 13
bootPLS 1 12
c060 3 10
Cascade 13
CascadeData 13
granova 13
mi4p 2 11
ModStatR 4 9
networkABC 13
OneTwoSamples 10 3
Patterns 13
penalizedSVM 13
peperr 13
plsdepot 13
plsdof 13
plspm 1 3 9
plsRbeta 3 10
plsRcox 13
plsRglm 3 10
robustfa 1 3 9
sageR 13
SelectBoost 13
survAUC 13
tester 1 12
turner 1 12

Package bigalgebra

Current CRAN status: OK: 13

Package BioStatR

Current CRAN status: OK: 13

Package bootPLS

Current CRAN status: FAIL: 1, OK: 12

Version: 1.0.1
Check: PDF version of manual
Result: FAIL Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: > #for (j in seq(3.01,9.51,by=0.5)) { > i=44 > #for ( i in 1:100){ > set.seed(i) > totdimi<-totdim[i] > ncompi<-ncomp[i] > datasim <- t(replicate(200,simul_data_UniYX_gamma(totdimi,ncompi,j,l))) > #} > #} > #} > pairs(datasim) > rm(i,j,l,totdimi,ncompi,datasim) > > > > ### * <FOOTER> > ### > cleanEx() > options(digits = 7L) > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n") Time elapsed: 15.61 1.34 26.12 NA NA > grDevices::dev.off() null device 1 > ### > ### Local variables: *** > ### mode: outline-minor *** > ### outline-regexp: "\\(> \\)?### [*]+" *** > ### End: *** > quit('no') ======== End of example output (where/before crash/hang up occured ?) ======== Flavor: r-devel-windows-x86_64

Package c060

Current CRAN status: NOTE: 3, OK: 10

Version: 0.3-0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: balancedFolds.Rd: EPSGO coef.intsearch.Rd: EPSGO plot.summary.int.Rd: EPSGO stabpath.Rd: glmnet summary.intsearch.Rd: EPSGO Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package Cascade

Current CRAN status: OK: 13

Package CascadeData

Current CRAN status: OK: 13

Package granova

Current CRAN status: OK: 13

Package mi4p

Current CRAN status: NOTE: 2, OK: 11

Version: 1.2
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'DAPAR', 'ProteoMM' Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package ModStatR

Current CRAN status: NOTE: 4, OK: 9

Version: 1.3.3
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: data 5.3Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package networkABC

Current CRAN status: OK: 13

Package OneTwoSamples

Current CRAN status: NOTE: 10, OK: 3

Version: 1.1-0
Check: Rd files
Result: NOTE checkRd: (-1) one_sample.Rd:40: Lost braces; missing escapes or markup? 40 | In two sided or one sided interval estimation of \code{sigma^2} of one normal sample, {side} is a parameter used to control whether to compute two sided or one sided interval estimation. When computing the one sided upper limit, input \code{side = -1}; when computing the one sided lower limit, input \code{side = 1}; when computing the two sided limits, input \code{side = 0} (default). | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Package Patterns

Current CRAN status: OK: 13

Package penalizedSVM

Current CRAN status: OK: 13

Package peperr

Current CRAN status: OK: 13

Package plsdepot

Current CRAN status: OK: 13

Package plsdof

Current CRAN status: OK: 13

Package plspm

Current CRAN status: WARN: 1, NOTE: 3, OK: 9

Version: 0.5.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: innerplot.Rd: plotmat outerplot.Rd: plotmat plot.plspm.Rd: plotmat Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 0.5.1
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘plspm_introduction.Rnw’ using knitr Error: processing vignette 'plspm_introduction.Rnw' failed with diagnostics: Running 'texi2dvi' on 'plspm_introduction.tex' failed. LaTeX errors: ! Undefined control sequence. l.120 \hlkwd{install.packages}\hldef {(}\hlsng{"plspm"}\hldef{)} ? ! Emergency stop. ! Emergency stop. l.120 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘plspm_introduction.Rnw’ SUMMARY: processing the following file failed: ‘plspm_introduction.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Package plsRbeta

Current CRAN status: NOTE: 3, OK: 10

Version: 0.3.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: PLS_beta_wvc.Rd: PLS_glm_kfoldcv_formula, PLS_lm_wvc Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package plsRcox

Current CRAN status: OK: 13

Package plsRglm

Current CRAN status: NOTE: 3, OK: 10

Version: 1.5.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: signpred.Rd: visweb Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package robustfa

Current CRAN status: WARN: 1, NOTE: 3, OK: 9

Version: 1.1-0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: FaCov.Rd: CovControl-class, CovControlMcd-class, CovMcd, CovClassic myplotDD.Rd: CovClassic, getDistance Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 1.1-0
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘robustfa-knitr.Rnw’ using knitr Error: processing vignette 'robustfa-knitr.Rnw' failed with diagnostics: Running 'texi2dvi' on 'robustfa-knitr.tex' failed. LaTeX errors: ! Undefined control sequence. l.1481 \hldef {faCovPcaRegMcd} \hlkwb{=} \hlkwd{FaCov}\hldef{(}\hlkwc{x} \h... ? ! Emergency stop. l.1481 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘robustfa-knitr.Rnw’ SUMMARY: processing the following file failed: ‘robustfa-knitr.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Package sageR

Current CRAN status: OK: 13

Package SelectBoost

Current CRAN status: OK: 13

Package survAUC

Current CRAN status: OK: 13

Package tester

Current CRAN status: WARN: 1, OK: 12

Version: 0.2.0
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘tester_introduction.Rnw’ using knitr Error: processing vignette 'tester_introduction.Rnw' failed with diagnostics: Running 'texi2dvi' on 'tester_introduction.tex' failed. LaTeX errors: ! Undefined control sequence. l.98 \hldef {object} \hlkwb{=} \hlkwd{matrix}\hldef{(letters[}\hlnum{1}\hlopt... ? ! Emergency stop. l.98 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘tester_introduction.Rnw’ SUMMARY: processing the following file failed: ‘tester_introduction.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

Package turner

Current CRAN status: WARN: 1, OK: 12

Version: 0.1.9
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘turner_introduction.Rnw’ using knitr Error: processing vignette 'turner_introduction.Rnw' failed with diagnostics: Running 'texi2dvi' on 'turner_introduction.tex' failed. LaTeX errors: ! Undefined control sequence. l.114 \hlkwd{library}\hldef {(turner)} ? ! Emergency stop. ! Emergency stop. l.114 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘turner_introduction.Rnw’ SUMMARY: processing the following file failed: ‘turner_introduction.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64

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They may not be fully stable and should be used with caution. We make no claims about them.